ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G092325, transcript: GRMZM2G092325_T01
Orthologs: AT5G01570 AT3G08880 GLYMA07G18970 LOC_Os04g36780
CCAGGATAAGGTTTCAGGATgtatcctttgaatctgttaccgtttcccctatattataggagaaaaaata ... atcgtttcgtacaaagatatggatgtgtggaagtccttagctttgatcagATATTGTCGACCAGAACAGG

#2
gene: GRMZM2G092325, transcript: GRMZM2G092325_T02
Orthologs: AT5G01570 AT3G08880 GLYMA07G18970 LOC_Os04g36780
CCAGGATAAGGTTTCAGGATgtatcctttgaatctgttaccgtttcccctatattataggagaaaaaata ... atcgtttcgtacaaagatatggatgtgtggaagtccttagctttgatcagATATTGTCGACCAGAACAGG

#3
gene: GRMZM2G092325, transcript: GRMZM2G092325_T03
Orthologs: AT5G01570 AT3G08880 GLYMA07G18970 LOC_Os04g36780
CCAGGATAAGGTTTCAGGATgtatcctttgaatctgttaccgtttcccctatattataggagaaaaaata ... atcgtttcgtacaaagatatggatgtgtggaagtccttagctttgatcagATATTGTCGACCAGAACAGG