ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G082809, transcript: GRMZM2G082809_T01
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  LOC_Os07g08790  Vv14s0081g00480  Vv05s0020g04880  
TCATATTCTGTCACTTCTTCgtatccttttttcttttcaaatattgatcatattaattttccagtggatc ... tgtatcccccaattttcattgtatccctcaatttcctgagctgtgtacagAACTGTAACTTCAGCGAGAG



#2
gene: GRMZM2G082809, transcript: GRMZM2G082809_T02
Orthologs: AT1G54460  AT3G04630  GLYMA20G36900  GLYMA20G34780  GLYMA19G43520  GLYMA10G32860  GLYMA10G30570  GLYMA03G40820  LOC_Os07g08790  Vv14s0081g00480  Vv05s0020g04880  
TCATATTCTGTCACTTCTTCgtatccttttttcttttcaaatattgatcatattaattttccagtggatc ... tgtatcccccaattttcattgtatccctcaatttcctgagctgtgtacagAACTGTAACTTCAGCGAGAG