ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G082809, transcript: GRMZM2G082809_T01
Orthologs: AT1G54460 AT3G04630 GLYMA20G36900 GLYMA20G34780 GLYMA19G43520 GLYMA10G32860 GLYMA10G30570 GLYMA03G40820 LOC_Os07g08790 Vv14s0081g00480 Vv05s0020g04880
TCATATTCTGTCACTTCTTCgtatccttttttcttttcaaatattgatcatattaattttccagtggatc ... tgtatcccccaattttcattgtatccctcaatttcctgagctgtgtacagAACTGTAACTTCAGCGAGAG

#2
gene: GRMZM2G082809, transcript: GRMZM2G082809_T02
Orthologs: AT1G54460 AT3G04630 GLYMA20G36900 GLYMA20G34780 GLYMA19G43520 GLYMA10G32860 GLYMA10G30570 GLYMA03G40820 LOC_Os07g08790 Vv14s0081g00480 Vv05s0020g04880
TCATATTCTGTCACTTCTTCgtatccttttttcttttcaaatattgatcatattaattttccagtggatc ... tgtatcccccaattttcattgtatccctcaatttcctgagctgtgtacagAACTGTAACTTCAGCGAGAG