ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G069916, transcript: GRMZM2G069916_T01
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os03g62640 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCTCTTCAACTGCGGAAAGAgtatccttcattttcctcgtcgtctttgttttttctctcttcattttttggaggaaaattttttgtgcaaagttccacatgtttcctgagctgttggtagTTATGAAGAAGCGAAAGCAA

#2
gene: GRMZM2G069916, transcript: GRMZM2G069916_T02
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os03g62640 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCTCTTCAACTGCGGAAAGAgtatccttcattttcctcgtcgtctttgttttttctctcttcattttttggaggaaaattttttgtgcaaagttccacatgtttcctgagctgttggtagTTATGAAGAAGCGAAAGCAA

#3
gene: GRMZM2G069916, transcript: GRMZM2G069916_T03
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os03g62640 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCTCTTCAACTGCGGAAAGAgtatccttcattttcctcgtcgtctttgttttttctctcttcattttttggaggaaaattttttgtgcaaagttccacatgtttcctgagctgttggtagTTATGAAGAAGCGAAAGCAA

#4
gene: GRMZM2G069916, transcript: GRMZM2G069916_T04
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os03g62640 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCTCTTCAACTGCGGAAAGAgtatccttcattttcctcgtcgtctttgttttttctctcttcattttttggaggaaaattttttgtgcaaagttccacatgtttcctgagctgttggtagTTATGAAGAAGCGAAAGCAA

#5
gene: GRMZM2G069916, transcript: GRMZM2G069916_T05
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os03g62640 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCTCTTCAACTGCGGAAAGAgtatccttcattttcctcgtcgtctttgttttttctctcttcattttttggaggaaaattttttgtgcaaagttccacatgtttcctgagctgttggtagTTATGAAGAAGCGAAAGCAA