ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT

#2
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG

#3
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT

#4
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT

#5
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG

#6
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT

#7
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG

#8
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT

#9
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610 AT1G54370 GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_163708 SELMODRAFT_144857 Vv15s0024g00280
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT