ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


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#1
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT



#2
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG



#3
gene: GRMZM2G067747, transcript: GRMZM2G067747_T01
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT



#4
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT



#5
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG



#6
gene: GRMZM2G067747, transcript: GRMZM2G067747_T02
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT



#7
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
GCTTCATCTTCTTCTCAATTgtatccttaaaaaagcattgtatagttttaacaaaagaataattactggc ... cctttcaattatttagtttaccttcgattccttgacttattcgaaaacagATATTCATAGTTGTTGCAAG



#8
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTATTACCTCCGATAATATTatatccttttttgaaattctttgtctatcacttggattttcttgatgaaa ... tactggagtatttttgaacattagatttgtattccttgactccaatatacCCAGTCGGGTTTCAGCTTAT



#9
gene: GRMZM2G067747, transcript: GRMZM2G067747_T04
Orthologs: AT1G79610  AT1G54370  GLYMA15G13030  GLYMA09G02130  GLYMA07G40070  LOC_Os09g11450  PP1S158_27V6  SELMODRAFT_163708  SELMODRAFT_144857  Vv15s0024g00280  
TTGGATTTATCTCTGCTCTTatatcctttttcctaagtcttaaatacaaaagtttgtttctagcatatga ... ctgcacattgagttactatataaccttgtgagcccttgaccactcaatacCTATTCAAATATGCTGGATT