ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G064330, transcript: GRMZM2G064330_T01
Orthologs: AT2G42240 GLYMA11G05690 GLYMA01G39560 LOC_Os06g47300 Vv07s0031g00180
GGCGAGGGAATGCGTTTAGAgtatcctacaattaagaaacttctaaaccattatattttgctgcaatttt ... tttccattaatctttctttacttgtgatctagtttcttaacatgttttagATATGCAAAATCACGGATGG

#2
gene: GRMZM2G064330, transcript: GRMZM2G064330_T02
Orthologs: AT2G42240 GLYMA11G05690 GLYMA01G39560 LOC_Os06g47300 Vv07s0031g00180
GGCGAGGGAATGCGTTTAGAgtatcctacaattaagaaacttctaaaccattatattttgctgcaatttt ... tttccattaatctttctttacttgtgatctagtttcttaacatgttttagATATGCAAAATCACGGATGG

#3
gene: GRMZM2G064330, transcript: GRMZM2G064330_T03
Orthologs: AT2G42240 GLYMA11G05690 GLYMA01G39560 LOC_Os06g47300 Vv07s0031g00180
GGCGAGGGAATGCGTTTAGAgtatcctacaattaagaaacttctaaaccattatattttgctgcaatttt ... tttccattaatctttctttacttgtgatctagtttcttaacatgttttagATATGCAAAATCACGGATGG

#4
gene: GRMZM2G064330, transcript: GRMZM2G064330_T04
Orthologs: AT2G42240 GLYMA11G05690 GLYMA01G39560 LOC_Os06g47300 Vv07s0031g00180
GGCGAGGGAATGCGTTTAGAgtatcctacaattaagaaacttctaaaccattatattttgctgcaatttt ... tttccattaatctttctttacttgtgatctagtttcttaacatgttttagATATGCAAAATCACGGATGG

#5
gene: GRMZM2G064330, transcript: GRMZM2G064330_T05
Orthologs: AT2G42240 GLYMA11G05690 GLYMA01G39560 LOC_Os06g47300 Vv07s0031g00180
GGCGAGGGAATGCGTTTAGAgtatcctacaattaagaaacttctaaaccattatattttgctgcaatttt ... tttccattaatctttctttacttgtgatctagtttcttaacatgttttagATATGCAAAATCACGGATGG