ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G064145, transcript: GRMZM2G064145_T01
Orthologs: AT5G08630 GLYMA08G00730 GLYMA05G33130 LOC_Os02g35100 PP1S281_85V6 PP1S21_391V6 Vv07s0031g03130
GAGATATTCCGAGATTATGAgtatcctttctgtatgctgctgttgcagtcaaatttgctgttatctgtgc ... gtagtttagcaatgcatgttttgaagcttgtatccttaacaacaaatcagAGAATACCTGAAGAGGCTAA

#2
gene: GRMZM2G064145, transcript: GRMZM2G064145_T02
Orthologs: AT5G08630 GLYMA08G00730 GLYMA05G33130 LOC_Os02g35100 PP1S281_85V6 PP1S21_391V6 Vv07s0031g03130
GAGATATTCCGAGATTATGAgtatcctttctgtatgctgctgttgcagtcaaatttgctgttatctgtgc ... gtagtttagcaatgcatgttttgaagcttgtatccttaacaacaaatcagAGAATACCTGAAGAGGCTAA

#3
gene: GRMZM2G064145, transcript: GRMZM2G064145_T03
Orthologs: AT5G08630 GLYMA08G00730 GLYMA05G33130 LOC_Os02g35100 PP1S281_85V6 PP1S21_391V6 Vv07s0031g03130
GAGATATTCCGAGATTATGAgtatcctttctgtatgctgctgttgcagtcaaatttgctgttatctgtgc ... gtagtttagcaatgcatgttttgaagcttgtatccttaacaacaaatcagAGAATACCTGAAGAGGCTAA

#4
gene: GRMZM2G064145, transcript: GRMZM2G064145_T04
Orthologs: AT5G08630 GLYMA08G00730 GLYMA05G33130 LOC_Os02g35100 PP1S281_85V6 PP1S21_391V6 Vv07s0031g03130
GAGATATTCCGAGATTATGAgtatcctttctgtatgctgctgttgcagtcaaatttgctgttatctgtgc ... gtagtttagcaatgcatgttttgaagcttgtatccttaacaacaaatcagAGAATACCTGAAGAGGCTAA