ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G063253, transcript: GRMZM2G063253_T01
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#2
gene: GRMZM2G063253, transcript: GRMZM2G063253_T02
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... acatgccttgttcttgcttttggttatgttttgcttcacgatccgtttagCTGGAGAAACATACTTGGAA



#3
gene: GRMZM2G063253, transcript: GRMZM2G063253_T03
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#4
gene: GRMZM2G063253, transcript: GRMZM2G063253_T04
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#5
gene: GRMZM2G063253, transcript: GRMZM2G063253_T06
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#6
gene: GRMZM2G063253, transcript: GRMZM2G063253_T07
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#7
gene: GRMZM2G063253, transcript: GRMZM2G063253_T08
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... ttgagtttctgttttgtggtcagtttctgtaatctttaaccgttcatcagATGACAAACACTATCCAGAA



#8
gene: GRMZM2G063253, transcript: GRMZM2G063253_T09
Orthologs: AT2G30460  AT1G06890  GLYMA06G14970  GLYMA04G39920  LOC_Os05g07670  PP1S311_78V6  PP1S123_22V6  SELMODRAFT_268189  SELMODRAFT_268896  Vv13s0067g02970  
CGACTTGCATTGCTCAAATTgtatcctttcatcagaagctcctatttatttcccacaaactaaagtttag ... acatgccttgttcttgcttttggttatgttttgcttcacgatccgtttagCTGGAGAAACATACTTGGAA