ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G061928, transcript: GRMZM2G061928_T01
Orthologs: AT4G01480  AT1G01050  GLYMA19G45050  GLYMA16G01960  GLYMA07G05390  GLYMA03G42280  LOC_Os04g59040  SELMODRAFT_167898  SELMODRAFT_147848  Vv02s0025g02980  
CAAGCGGTTCTTTGAAGATTgtatcctgctcgattcatctattgttttctgactacacaatgctctagta ... ttgggacgatcacatccacaggtttaagcttccttagcggtatcttctagATAAGAAGAATGAGAATAAA



#2
gene: GRMZM2G061928, transcript: GRMZM2G061928_T02
Orthologs: AT4G01480  AT1G01050  GLYMA19G45050  GLYMA16G01960  GLYMA07G05390  GLYMA03G42280  LOC_Os04g59040  SELMODRAFT_167898  SELMODRAFT_147848  Vv02s0025g02980  
CAAGCGGTTCTTTGAAGATTgtatcctgctcgattcatctattgttttctgactacacaatgctctagta ... ttgggacgatcacatccacaggtttaagcttccttagcggtatcttctagATAAGAAGAATGAGAATAAA



#3
gene: GRMZM2G061928, transcript: GRMZM2G061928_T03
Orthologs: AT4G01480  AT1G01050  GLYMA19G45050  GLYMA16G01960  GLYMA07G05390  GLYMA03G42280  LOC_Os04g59040  SELMODRAFT_167898  SELMODRAFT_147848  Vv02s0025g02980  
CAAGCGGTTCTTTGAAGATTgtatcctgctcgattcatctattgttttctgactacacaatgctctagta ... ttgggacgatcacatccacaggtttaagcttccttagcggtatcttctagATAAGAAGAATGAGAATAAA



#4
gene: GRMZM2G061928, transcript: GRMZM2G061928_T04
Orthologs: AT4G01480  AT1G01050  GLYMA19G45050  GLYMA16G01960  GLYMA07G05390  GLYMA03G42280  LOC_Os04g59040  SELMODRAFT_167898  SELMODRAFT_147848  Vv02s0025g02980  
CAAGCGGTTCTTTGAAGATTgtatcctgctcgattcatctattgttttctgactacacaatgctctagta ... ttgggacgatcacatccacaggtttaagcttccttagcggtatcttctagATAAGAAGAATGAGAATAAA