ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G053008, transcript: GRMZM2G053008_T01
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GTTCACCTTAGGTGATTCCTgtatccttgatgaattgatcagttttgatttctctcatagcgagtacact ... aactccgcttggatgaggtgccccatttgttttcccataacctatgtcagATGCATTTGGTGAAGGCTTC



#2
gene: GRMZM2G053008, transcript: GRMZM2G053008_T01
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GCTTCCGTTCAACACTCAAGatatcctttgggaaaatttgtctatgtctctaggatatcgtgatcttcat ... taattgtccaatatgtgcatgccttttttgtgatcttaactgtcatatacTTGTCCCGGAGAAGATTAAT



#3
gene: GRMZM2G053008, transcript: GRMZM2G053008_T02
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GTTCACCTTAGGTGATTCCTgtatccttgatgaattgatcagttttgatttctctcatagcgagtacact ... aactccgcttggatgaggtgccccatttgttttcccataacctatgtcagATGCATTTGGTGAAGGCTTC



#4
gene: GRMZM2G053008, transcript: GRMZM2G053008_T02
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GCTTCCGTTCAACACTCAAGatatcctttgggaaaatttgtctatgtctctaggatatcgtgatcttcat ... taattgtccaatatgtgcatgccttttttgtgatcttaactgtcatatacTTGTCCCGGAGAAGATTAAT



#5
gene: GRMZM2G053008, transcript: GRMZM2G053008_T03
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GTTCACCTTAGGTGATTCCTgtatccttgatgaattgatcagttttgatttctctcatagcgagtacact ... aactccgcttggatgaggtgccccatttgttttcccataacctatgtcagATGCATTTGGTGAAGGCTTC



#6
gene: GRMZM2G053008, transcript: GRMZM2G053008_T03
Orthologs: AT3G49410  AT5G24450  GLYMA11G08780  LOC_Os01g34430  Vv05s0094g01370  
GCTTCCGTTCAACACTCAAGatatcctttgggaaaatttgtctatgtctctaggatatcgtgatcttcat ... taattgtccaatatgtgcatgccttttttgtgatcttaactgtcatatacTTGTCCCGGAGAAGATTAAT