ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GRMZM2G052546, transcript: GRMZM2G052546_T01
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  LOC_Os03g01750  PP1S14_180V6  PP1S144_24V6  Vv00s0250g00020  
CAGCAAGATTCAGATCTTGAgtatccccactaacattttgtaacgcgtctcttaaagctagtctactgat ... ttccattctgtgaaatatatctttcttcctttaccaacaaacttgttcagATATTTTGGAGTCGACATCC



#2
gene: GRMZM2G052546, transcript: GRMZM2G052546_T02
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  LOC_Os03g01750  PP1S14_180V6  PP1S144_24V6  Vv00s0250g00020  
CAGCAAGATTCAGATCTTGAgtatccccactaacattttgtaacgcgtctcttaaagctagtctactgat ... ttccattctgtgaaatatatctttcttcctttaccaacaaacttgttcagATATTTTGGAGTCGACATCC



#3
gene: GRMZM2G052546, transcript: GRMZM2G052546_T03
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  LOC_Os03g01750  PP1S14_180V6  PP1S144_24V6  Vv00s0250g00020  
CAGCAAGATTCAGATCTTGAgtatccccactaacattttgtaacgcgtctcttaaagctagtctactgat ... ttccattctgtgaaatatatctttcttcctttaccaacaaacttgttcagATATTTTGGAGTCGACATCC



#4
gene: GRMZM2G052546, transcript: GRMZM2G052546_T04
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  LOC_Os03g01750  PP1S14_180V6  PP1S144_24V6  Vv00s0250g00020  
CAGCAAGATTCAGATCTTGAgtatccccactaacattttgtaacgcgtctcttaaagctagtctactgat ... ttccattctgtgaaatatatctttcttcctttaccaacaaacttgttcagATATTTTGGAGTCGACATCC



#5
gene: GRMZM2G052546, transcript: GRMZM2G052546_T07
Orthologs: AT3G52180  GLYMA20G33190  GLYMA10G34370  LOC_Os03g01750  PP1S14_180V6  PP1S144_24V6  Vv00s0250g00020  
CAGCAAGATTCAGATCTTGAgtatccccactaacattttgtaacgcgtctcttaaagctagtctactgat ... ttccattctgtgaaatatatctttcttcctttaccaacaaacttgttcagATATTTTGGAGTCGACATCC