ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G028096, transcript: GRMZM2G028096_T02
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os02g39300 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCGCTGCAACTGCGCAAAGAgtatccttccaagtgaacagttactttatcttgtgtatttgtttgtgggg ... gcaattggttgaaattacccagttctatgtcttcctgagtgtgtcaatagATATGAAGAAGCCAAAGCCA

#2
gene: GRMZM2G028096, transcript: GRMZM2G028096_T03
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os02g39300 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCGCTGCAACTGCGCAAAGAgtatccttccaagtgaacagttactttatcttgtgtatttgtttgtgggg ... gcaattggttgaaattacccagttctatgtcttcctgagtgtgtcaatagATATGAAGAAGCCAAAGCCA

#3
gene: GRMZM2G028096, transcript: GRMZM2G028096_T04
Orthologs: AT3G03340 AT5G17440 GLYMA18G47910 GLYMA09G38430 LOC_Os02g39300 PP1S88_36V6 PP1S402_41V6 Vv04s0023g00800
TCGCTGCAACTGCGCAAAGAgtatccttccaagtgaacagttactttatcttgtgtatttgtttgtgggg ... gcaattggttgaaattacccagttctatgtcttcctgagtgtgtcaatagATATGAAGAAGCCAAAGCCA