ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G001444, transcript: GRMZM2G001444_T01
Orthologs: AT4G15030 GLYMA13G27240 GLYMA12G36550 LOC_Os11g42000 Vv13s0064g00870
TATGACAAGCTGTTTAAGGAgtatcctttttttatatttgatattgtattgttttttctgtaaggacata ... tgtactattcctttttctccattgtgcttagagtccttaacatgagatagGTATTGCATTGCTGATATGA

#2
gene: GRMZM2G001444, transcript: GRMZM2G001444_T02
Orthologs: AT4G15030 GLYMA13G27240 GLYMA12G36550 LOC_Os11g42000 Vv13s0064g00870
TATGACAAGCTGTTTAAGGAgtatcctttttttatatttgatattgtattgttttttctgtaaggacata ... tgtactattcctttttctccattgtgcttagagtccttaacatgagatagGTATTGCATTGCTGATATGA

#3
gene: GRMZM2G001444, transcript: GRMZM2G001444_T04
Orthologs: AT4G15030 GLYMA13G27240 GLYMA12G36550 LOC_Os11g42000 Vv13s0064g00870
TATGACAAGCTGTTTAAGGAgtatcctttttttatatttgatattgtattgttttttctgtaaggacata ... tgtactattcctttttctccattgtgcttagagtccttaacatgagatagGTATTGCATTGCTGATATGA

#4
gene: GRMZM2G001444, transcript: GRMZM2G001444_T05
Orthologs: AT4G15030 GLYMA13G27240 GLYMA12G36550 LOC_Os11g42000 Vv13s0064g00870
TATGACAAGCTGTTTAAGGAgtatcctttttttatatttgatattgtattgttttttctgtaaggacata ... tgtactattcctttttctccattgtgcttagagtccttaacatgagatagGTATTGCATTGCTGATATGA