ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GRMZM2G000937, transcript: GRMZM2G000937_T01
Orthologs: AT5G14850 GLYMA13G01500 LOC_Os01g39810 PP1S32_143V6 Vv11s0037g01100
GTCAAGTTGCTAAGTGGACGgtatccttaaactcatttatgtacctatacaattttcttcgtgagtatatgacttcaacaaccttggatgtcggccttaacaaactgtttgcagTTATTTTCTCAGTTGGTTAA

#2
gene: GRMZM2G000937, transcript: GRMZM2G000937_T02
Orthologs: AT5G14850 GLYMA13G01500 LOC_Os01g39810 PP1S32_143V6 Vv11s0037g01100
GTCAAGTTGCTAAGTGGACGgtatccttaaactcatttatgtacctatacaattttcttcgtgagtatatgacttcaacaaccttggatgtcggccttaacaaactgtttgcagTTATTTTCTCAGTTGGTTAA

#3
gene: GRMZM2G000937, transcript: GRMZM2G000937_T03
Orthologs: AT5G14850 GLYMA13G01500 LOC_Os01g39810 PP1S32_143V6 Vv11s0037g01100
GTCAAGTTGCTAAGTGGACGgtatccttaaactcatttatgtacctatacaattttcttcgtgagtatatgacttcaacaaccttggatgtcggccttaacaaactgtttgcagTTATTTTCTCAGTTGGTTAA