ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA20G30540, transcript: GLYMA20G30540.1
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
CACAAGAAGGGAAGTGGCTCgtatccttttggttctcagttactgtttaagaattgtatcatcacacatt ... gcttcatttattttaatctagctattcaaattccttaatgccatttttagATATTTTTCGCCCTTTTGTT

#2
gene: GLYMA20G30540, transcript: GLYMA20G30540.2
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
TACGAGACGGGAAGTGGCTCgtatcctttttgttctcagatactgtataggaattgtataatcatacttt ... gaattgtattgtcatactttcaactgtcttgtccttaatgtcatttttagATATTTTTCGCCCTTTTGTT

#3
gene: GLYMA20G30540, transcript: GLYMA20G30540.3
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
TACGAGACGGGAAGTGGCTCgtatcctttttgttctcagatactgtataggaattgtataatcatacttt ... gaattgtattgtcatactttcaactgtcttgtccttaatgtcatttttagATATTTTTCGCCCTTTTGTT

#4
gene: GLYMA20G30540, transcript: GLYMA20G30540.4
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
CACAAGAAGGGAAGTGGCTCgtatccttttggttctcagttactgtttaagaattgtatcatcacacatt ... gcttcatttattttaatctagctattcaaattccttaatgccatttttagATATTTTTCGCCCTTTTGTT