ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GLYMA19G43520, transcript: GLYMA19G43520.1
Orthologs: AT1G54460  AT3G04630  LOC_Os07g08790  LOC_Os03g58480  Vv14s0081g00480  AC148167.6_FG001  GRMZM2G082809  GRMZM2G121176  GRMZM2G163912  
AATTGGTCTGCTGCTTCCTCgtatcctcaaaacttaaacattttgattgtttattctgaacagatcaatt ... atatgtaatatggtgtttgttttcatttgttctttaaccataattagtagCGTTGCATCTGCACGCACTG



#2
gene: GLYMA19G43520, transcript: GLYMA19G43520.2
Orthologs: AT1G54460  AT3G04630  LOC_Os07g08790  LOC_Os03g58480  Vv14s0081g00480  AC148167.6_FG001  GRMZM2G082809  GRMZM2G121176  GRMZM2G163912  
AATTGGTCTGCTGCTTCCTCgtatcctcaaaacttaaacattttgattgtttattctgaacagatcaatt ... gtaatatgtaatatggtgtttgttttcatttgttctttaaccataattagTAGCGTTGCATCTGCACGCA



#3
gene: GLYMA19G43520, transcript: GLYMA19G43520.3
Orthologs: AT1G54460  AT3G04630  LOC_Os07g08790  LOC_Os03g58480  Vv14s0081g00480  AC148167.6_FG001  GRMZM2G082809  GRMZM2G121176  GRMZM2G163912  
AATTGGTCTGCTGCTTCCTCgtatcctcaaaacttaaacattttgattgtttattctgaacagatcaatt ... atatgtaatatggtgtttgttttcatttgttctttaaccataattagtagCGTTGCATCTGCACGCACTG



#4
gene: GLYMA19G43520, transcript: GLYMA19G43520.4
Orthologs: AT1G54460  AT3G04630  LOC_Os07g08790  LOC_Os03g58480  Vv14s0081g00480  AC148167.6_FG001  GRMZM2G082809  GRMZM2G121176  GRMZM2G163912  
AATTGGTCTGCTGCTTCCTCgtatcctcaaaacttaaacattttgattgtttattctgaacagatcaatt ... atatgtaatatggtgtttgttttcatttgttctttaaccataattagtagCGTTGCATCTGCACGCACTG