ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA15G10460, transcript: GLYMA15G10460.1
Orthologs: AT2G39080 LOC_Os01g26920 LOC_Os01g26970 PP1S91_170V6 PP1S223_97V6 SELMODRAFT_438793 GRMZM2G017853
TAAGACTGTCTGGACTTTATatatccttttcaaaattcagtttactaggattccaactattcattcatct ... tgtttatcagtttatgtctagtgtctgcttccaaccttgacattttaaacAAAGTAGATAAAGGTGCACA

#2
gene: GLYMA15G10460, transcript: GLYMA15G10460.2
Orthologs: AT2G39080 LOC_Os01g26920 LOC_Os01g26970 PP1S91_170V6 PP1S223_97V6 SELMODRAFT_438793 GRMZM2G017853
TAAGACTGTCTGGACTTTATatatccttttcaaaattcagtttactaggattccaactattcattcatct ... tgtttatcagtttatgtctagtgtctgcttccaaccttgacattttaaacAAAGTAGATAAAGGTGCACA

#3
gene: GLYMA15G10460, transcript: GLYMA15G10460.3
Orthologs: AT2G39080 LOC_Os01g26920 LOC_Os01g26970 PP1S91_170V6 PP1S223_97V6 SELMODRAFT_438793 GRMZM2G017853
TAAGACTGTCTGGACTTTATatatccttttcaaaattcagtttactaggattccaactattcattcatct ... tgtttatcagtttatgtctagtgtctgcttccaaccttgacattttaaacAAAGTAGATAAAGGTGCACA

#4
gene: GLYMA15G10460, transcript: GLYMA15G10460.4
Orthologs: AT2G39080 LOC_Os01g26920 LOC_Os01g26970 PP1S91_170V6 PP1S223_97V6 SELMODRAFT_438793 GRMZM2G017853
TAAGACTGTCTGGACTTTATatatccttttcaaaattcagtttactaggattccaactattcattcatct ... tgtttatcagtttatgtctagtgtctgcttccaaccttgacattttaaacAAAGTAGATAAAGGTGCACA