ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA14G16680, transcript: GLYMA14G16680.1
Orthologs: LOC_Os01g46020 LOC_Os05g28010 PP1S34_14V6 GRMZM2G147614
AGGAACAGCGGACAATCTTGatatccttacatctttgtttgtctcaaatagcaatttagcaaaattttca ... tgatagtggaaacaagcttaactttggttatttccttgaccgaaattcacATGTGGAAACAGCTGAGCAA

#2
gene: GLYMA14G16680, transcript: GLYMA14G16680.2
Orthologs: LOC_Os01g46020 LOC_Os05g28010 PP1S34_14V6 GRMZM2G147614
AGGAACAGCGGACAATCTTGatatccttacatctttgtttgtctcaaatagcaatttagcaaaattttca ... tgatagtggaaacaagcttaactttggttatttccttgaccgaaattcacATGTGGAAACAGCTGAGCAA

#3
gene: GLYMA14G16680, transcript: GLYMA14G16680.3
Orthologs: LOC_Os01g46020 LOC_Os05g28010 PP1S34_14V6 GRMZM2G147614
AGGAACAGCGGACAATCTTGatatccttacatctttgtttgtctcaaatagcaatttagcaaaattttca ... tgatagtggaaacaagcttaactttggttatttccttgaccgaaattcacATGTGGAAACAGCTGAGCAA