ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA11G03840, transcript: GLYMA11G03840.1
Orthologs: AT2G39810  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
GGTTTCTTTAATTTGCCACTgtatccttttctacatcagtccttttattggcatattttattttattatt ... gtctgtcacttgtctccgctttcgcattttcttgaccagaaattttacagACATCACTGATGTATGTATG



#2
gene: GLYMA11G03840, transcript: GLYMA11G03840.1
Orthologs: AT2G39810  LOC_Os03g52700  PP1S51_66V6  PP1S274_80V6  SELMODRAFT_81560  SELMODRAFT_88092  Vv00s0299g00030  GRMZM2G312738  GRMZM2G078736  AC190915.3_FG007  GRMZM2G473172  
TGGTTGCAAAACAGGCCATTgtatccttttacccccaaattttattgtgggtgtagaactgtgtttgttt ... aatagttattaagttgaagcaatacttatttcattccttaacatctgtagTTTCTGTATTATTTATATGA