ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA10G32860, transcript: GLYMA10G32860.1
Orthologs: LOC_Os07g08790 LOC_Os03g58480 Vv05s0020g04880 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
TCTTGTTCAGTTGCTTCAATgtatcctcttaaatatgttgcagtgaagagtgtcaaattctcatgtcgag ... ctacttccttttaaaatttgaaattgcttttactccttgaccatgtaaagAACTGCAGCTTCTGTGCGAT

#2
gene: GLYMA10G32860, transcript: GLYMA10G32860.2
Orthologs: LOC_Os07g08790 LOC_Os03g58480 Vv05s0020g04880 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
TCTTGTTCAGTTGCTTCAATgtatcctcttaaatatgttgcagtgaagagtgtcaaattctcatgtcgag ... ctacttccttttaaaatttgaaattgcttttactccttgaccatgtaaagAACTGCAGCTTCTGTGCGAT

#3
gene: GLYMA10G32860, transcript: GLYMA10G32860.3
Orthologs: LOC_Os07g08790 LOC_Os03g58480 Vv05s0020g04880 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
TCTTGTTCAGTTGCTTCAATgtatcctcttaaatatgttgcagtgaagagtgtcaaattctcatgtcgag ... ctacttccttttaaaatttgaaattgcttttactccttgaccatgtaaagAACTGCAGCTTCTGTGCGAT

#4
gene: GLYMA10G32860, transcript: GLYMA10G32860.4
Orthologs: LOC_Os07g08790 LOC_Os03g58480 Vv05s0020g04880 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
TCTTGTTCAGTTGCTTCAATgtatcctcttaaatatgttgcagtgaagagtgtcaaattctcatgtcgag ... ctacttccttttaaaatttgaaattgcttttactccttgaccatgtaaagAACTGCAGCTTCTGTGCGAT