ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA10G23470, transcript: GLYMA10G23470.1
Orthologs: AT5G51180 LOC_Os02g43850 LOC_Os08g04810 SELMODRAFT_107416 SELMODRAFT_124920 Vv16s0013g01410 GRMZM2G130432
TTCAAATGTGGACTATGATCgtatccgtcttatttgcttcttctttaaactaattctaggtgcattcagctttcttcattgcatattattttttatggttttcctttataaaaaaaatagATATTGTTGGCTGGAGAACA

#2
gene: GLYMA10G23470, transcript: GLYMA10G23470.2
Orthologs: AT5G51180 LOC_Os02g43850 LOC_Os08g04810 SELMODRAFT_107416 SELMODRAFT_124920 Vv16s0013g01410 GRMZM2G130432
TTCAAATGTGGACTATGATCgtatccgtcttatttgcttcttctttaaactaattctaggtgcattcagctttcttcattgcatattattttttatggttttcctttataaaaaaaatagATATTGTTGGCTGGAGAACA

#3
gene: GLYMA10G23470, transcript: GLYMA10G23470.3
Orthologs: AT5G51180 LOC_Os02g43850 LOC_Os08g04810 SELMODRAFT_107416 SELMODRAFT_124920 Vv16s0013g01410 GRMZM2G130432
TTCAAATGTGGACTATGATCgtatccgtcttatttgcttcttctttaaactaattctaggtgcattcagctttcttcattgcatattattttttatggttttcctttataaaaaaaatagATATTGTTGGCTGGAGAACA

#4
gene: GLYMA10G23470, transcript: GLYMA10G23470.4
Orthologs: AT5G51180 LOC_Os02g43850 LOC_Os08g04810 SELMODRAFT_107416 SELMODRAFT_124920 Vv16s0013g01410 GRMZM2G130432
TTCAAATGTGGACTATGATCgtatccgtcttatttgcttcttctttaaactaattctaggtgcattcagctttcttcattgcatattattttttatggttttcctttataaaaaaaatagATATTGTTGGCTGGAGAACA