ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA09G39680, transcript: GLYMA09G39680.1
Orthologs: AT3G46210 LOC_Os03g63720 PP1S190_85V6 Vv04s0008g03440 GRMZM2G083620
TTGTACACGATGATGGTGCTgtatcctattttaaaattcagttctaatatggtttatatggtgactgttt ... atatatatgcttctggatcttttgctccgttttcttgacttaatatgtagCTTCTTCCATGTGCAATAAA

#2
gene: GLYMA09G39680, transcript: GLYMA09G39680.2
Orthologs: AT3G46210 LOC_Os03g63720 PP1S190_85V6 Vv04s0008g03440 GRMZM2G083620
TTGTACACGATGATGGTGCTgtatcctattttaaaattcagttctaatatggtttatatggtgactgttt ... atatatatgcttctggatcttttgctccgttttcttgacttaatatgtagCTTCTTCCATGTGCAATAAA

#3
gene: GLYMA09G39680, transcript: GLYMA09G39680.3
Orthologs: AT3G46210 LOC_Os03g63720 PP1S190_85V6 Vv04s0008g03440 GRMZM2G083620
TTGTACACGATGATGGTGCTgtatcctattttaaaattcagttctaatatggtttatatggtgactgttt ... atatatatgcttctggatcttttgctccgttttcttgacttaatatgtagCTTCTTCCATGTGCAATAAA