ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GLYMA06G07000, transcript: GLYMA06G07000.1
Orthologs: AT2G25310  AT4G32130  LOC_Os06g43650  PP1S168_27V6  Vv04s0008g06490  GRMZM2G169184  GRMZM2G105167  
CCTGATGGATATTTCGCATTgtatcctttcattttcaacttaatttctacttctgtttaatttgcatgat ... gcaaatcattgttaagagatgatttaattccttaacgtgtatactttaagCCACAATGTTCCTGCCGGGA



#2
gene: GLYMA06G07000, transcript: GLYMA06G07000.2
Orthologs: AT2G25310  AT4G32130  LOC_Os06g43650  PP1S168_27V6  Vv04s0008g06490  GRMZM2G169184  GRMZM2G105167  
CCTGATGGATATTTCGCATTgtatcctttcattttcaacttaatttctacttctgtttaatttgcatgat ... gcaaatcattgttaagagatgatttaattccttaacgtgtatactttaagCCACAATGTTCCTGCCGGGA



#3
gene: GLYMA06G07000, transcript: GLYMA06G07000.3
Orthologs: AT2G25310  AT4G32130  LOC_Os06g43650  PP1S168_27V6  Vv04s0008g06490  GRMZM2G169184  GRMZM2G105167  
CCTGATGGATATTTCGCATTgtatcctttcattttcaacttaatttctacttctgtttaatttgcatgat ... gcaaatcattgttaagagatgatttaattccttaacgtgtatactttaagCCACAATGTTCCTGCCGGGA



#4
gene: GLYMA06G07000, transcript: GLYMA06G07000.4
Orthologs: AT2G25310  AT4G32130  LOC_Os06g43650  PP1S168_27V6  Vv04s0008g06490  GRMZM2G169184  GRMZM2G105167  
CCTGATGGATATTTCGCATTgtatcctttcattttcaacttaatttctacttctgtttaatttgcatgat ... gcaaatcattgttaagagatgatttaattccttaacgtgtatactttaagCCACAATGTTCCTGCCGGGA