ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA05G06080, transcript: GLYMA05G06080.1
Orthologs: AT1G32400 LOC_Os08g18044 LOC_Os08g06250 PP1S64_81V6 PP1S197_11V6 PP1S54_193V6 SELMODRAFT_172827 Vv02s0012g00560 GRMZM2G049422 GRMZM2G138429 GRMZM2G065076
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT

#2
gene: GLYMA05G06080, transcript: GLYMA05G06080.2
Orthologs: AT1G32400 LOC_Os08g18044 LOC_Os08g06250 PP1S64_81V6 PP1S197_11V6 PP1S54_193V6 SELMODRAFT_172827 Vv02s0012g00560 GRMZM2G049422 GRMZM2G138429 GRMZM2G065076
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT

#3
gene: GLYMA05G06080, transcript: GLYMA05G06080.3
Orthologs: AT1G32400 LOC_Os08g18044 LOC_Os08g06250 PP1S64_81V6 PP1S197_11V6 PP1S54_193V6 SELMODRAFT_172827 Vv02s0012g00560 GRMZM2G049422 GRMZM2G138429 GRMZM2G065076
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT