ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: GLYMA05G06080, transcript: GLYMA05G06080.1
Orthologs: AT1G32400  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT



#2
gene: GLYMA05G06080, transcript: GLYMA05G06080.2
Orthologs: AT1G32400  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT



#3
gene: GLYMA05G06080, transcript: GLYMA05G06080.3
Orthologs: AT1G32400  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
ATGGGTGCTGCCTGAGCTTTgtatccttctaaaattgtcttataattacatagccaagcaaaatttaatg ... tgtgtattaatcttgaaggaattgatattagtttccttaatccaacaaagTATTCTGTTTTAGTGTTGTT