ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: GLYMA02G09230, transcript: GLYMA02G09230.1
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
CACCAGAAGGGAAGTAGCTCgtatccttttcattttgatgcaatgcttaggaatttcatcttgcttttta ... cattgatattagttcagttattcatatcatattccttaacatcaccttagATATTTTTCGCCCTTTTGTT

#2
gene: GLYMA02G09230, transcript: GLYMA02G09230.2
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
CACCAGAAGGGAAGTAGCTCgtatccttttcattttgatgcaatgcttaggaatttcatcttgcttttta ... cattgatattagttcagttattcatatcatattccttaacatcaccttagATATTTTTCGCCCTTTTGTT

#3
gene: GLYMA02G09230, transcript: GLYMA02G09230.3
Orthologs: AT1G76940 PP1S72_124V6 SELMODRAFT_59352 SELMODRAFT_69289 Vv18s0166g00240
CACCAGAAGGGAAGTAGCTCgtatccttttcattttgatgcaatgcttaggaatttcatcttgcttttta ... cattgatattagttcagttattcatatcatattccttaacatcaccttagATATTTTTCGCCCTTTTGTT