ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT5G47080, transcript: AT5G47080.1
Orthologs: GLYMA01G41230  GLYMA11G04180  GLYMA05G05650  GLYMA17G15950  GLYMA05G05620  LOC_Os07g31280  PP1S54_70V6  Vv02s0012g00080  GRMZM2G161611  GRMZM2G171613  
ACGATCAAAGTATCAAGGCAgtatccttttttctacagtttcacttctgctgatatagagttatataaat ... tgatctttggtgttacctttttttgcggttttccttaaaagaatgaacagACATTGATGGAGCTTACTTT



#2
gene: AT5G47080, transcript: AT5G47080.4
Orthologs: GLYMA01G41230  GLYMA11G04180  GLYMA05G05650  GLYMA17G15950  GLYMA05G05620  LOC_Os07g31280  PP1S54_70V6  Vv02s0012g00080  GRMZM2G161611  GRMZM2G171613  
ACGATCAAAGTATCAAGGCAgtatccttttttctacagtttcacttctgctgatatagagttatataaat ... tgatctttggtgttacctttttttgcggttttccttaaaagaatgaacagACATTGATGGAGCTTACTTT