ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT5G18410, transcript: AT5G18410.1
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
GAGATGTTCCGTGTAAACAAgtatcctttcttccagacatttatcaccatcgtgtggctgttaaagacat ... ttgtgccatttgactatattgcaagcttttggattccttagtaaattcagTGTGGAAGATATTCTCCAAG



#2
gene: AT5G18410, transcript: AT5G18410.1
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
CCTCCACGTGAAGCGCTAGAatatcctttaatattttcactgttacttgcctattttaactattatctgg ... ttgttaaccgtacacatgctttgaaaattgcaagccttaacatattttacATATCAGAGGCACTATTTGA



#3
gene: AT5G18410, transcript: AT5G18410.2
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
GAGATGTTCCGTGTAAACAAgtatcctttcttccagacatttatcaccatcgtgtggctgttaaagacat ... ttgtgccatttgactatattgcaagcttttggattccttagtaaattcagTGTGGAAGATATTCTCCAAG



#4
gene: AT5G18410, transcript: AT5G18410.2
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
CCTCCACGTGAAGCGCTAGAatatcctttaatattttcactgttacttgcctattttaactattatctgg ... ttgttaaccgtacacatgctttgaaaattgcaagccttaacatattttacATATCAGAGGCACTATTTGA



#5
gene: AT5G18410, transcript: AT5G18410.3
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
GAGATGTTCCGTGTAAACAAgtatcctttcttccagacatttatcaccatcgtgtggctgttaaagacat ... ttgtgccatttgactatattgcaagcttttggattccttagtaaattcagTGTGGAAGATATTCTCCAAG



#6
gene: AT5G18410, transcript: AT5G18410.3
Orthologs: GLYMA03G41350  GLYMA19G43970  PP1S441_22V6  Vv04s0043g00740  GRMZM2G170567  
CCTCCACGTGAAGCGCTAGAatatcctttaatattttcactgttacttgcctattttaactattatctgg ... ttgttaaccgtacacatgctttgaaaattgcaagccttaacatattttacATATCAGAGGCACTATTTGA