ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT5G12210, transcript: AT5G12210.1
Orthologs: GLYMA08G11710 GLYMA05G28630 LOC_Os08g40140 PP1S34_430V6 PP1S163_87V6 SELMODRAFT_145221 SELMODRAFT_269919 Vv12s0134g00150 Vv15s0024g00080 GRMZM2G124557
CATTGGGAAAGTGTCAAGTTgtatccttttgcacttagctttttgtcaatgtcactaactcgttcttctt ... aaccctgccttatagtagatattattatgttttcctatatacaatattagATGTTGCTAAGTTGCAGAAT

#2
gene: AT5G12210, transcript: AT5G12210.2
Orthologs: GLYMA08G11710 GLYMA05G28630 LOC_Os08g40140 PP1S34_430V6 PP1S163_87V6 SELMODRAFT_145221 SELMODRAFT_269919 Vv12s0134g00150 Vv15s0024g00080 GRMZM2G124557
CATTGGGAAAGTGTCAAGTTgtatccttttgcacttagctttttgtcaatgtcactaactcgttcttctt ... aaccctgccttatagtagatattattatgttttcctatatacaatattagATGTTGCTAAGTTGCAGAAT