ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT4G09720, transcript: AT4G09720.1
Orthologs: GLYMA20G31150  GLYMA10G36420  LOC_Os01g51700  LOC_Os05g46000  Vv18s0001g02250  GRMZM2G090034  
AAAACCTCCTTGATGAATCAgtatccttttcaattgaacaattcattcgatttggggttaattggctaca ... tcgtgtattgattatgtgattatgtgaagtctttaattggtgaattttagATATGTGCATAAGAAGTTTA



#2
gene: AT4G09720, transcript: AT4G09720.3
Orthologs: GLYMA20G31150  GLYMA10G36420  LOC_Os01g51700  LOC_Os05g46000  Vv18s0001g02250  GRMZM2G090034  
AAAACCTCCTTGATGAATCAgtatccttttcaattgaacaattcattcgatttggggttaattggctaca ... tcgtgtattgattatgtgattatgtgaagtctttaattggtgaattttagATATGTGCATAAGAAGTTTA



#3
gene: AT4G09720, transcript: AT4G09720.4
Orthologs: GLYMA20G31150  GLYMA10G36420  LOC_Os01g51700  LOC_Os05g46000  Vv18s0001g02250  GRMZM2G090034  
AAAACCTCCTTGATGAATCAgtatccttttcaattgaacaattcattcgatttggggttaattggctaca ... tcgtgtattgattatgtgattatgtgaagtctttaattggtgaattttagATATGTGCATAAGAAGTTTA