ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT3G46210, transcript: AT3G46210.1
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA



#2
gene: AT3G46210, transcript: AT3G46210.2
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA



#3
gene: AT3G46210, transcript: AT3G46210.3
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA



#4
gene: AT3G46210, transcript: AT3G46210.4
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA



#5
gene: AT3G46210, transcript: AT3G46210.5
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA



#6
gene: AT3G46210, transcript: AT3G46210.6
Orthologs: GLYMA09G39680  GLYMA17G18550  GLYMA14G12880  LOC_Os03g63720  PP1S190_85V6  Vv04s0008g03440  GRMZM2G083620  
TTGTGCATGATGATGGTTCTgtatcctttttatgatccttgccttttggtaaacatttactgatactgtg ... actttagaagacagtttttgctgctttttccttgattcaattctgtttagCTTCTACCATGTGCGATAAA