ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT3G16230, transcript: AT3G16230.1
Orthologs: LOC_Os01g13100  LOC_Os01g13090  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
CCGGCTTTTACGTGCTTGTCgtatcctagattttagtacgaatgttatttatagtagtggcatggttaga ... aattaagagtttagtgtaaatgctttcgattttcttaataccaagttcagAAGTTATTACTGATGCATTT



#2
gene: AT3G16230, transcript: AT3G16230.2
Orthologs: LOC_Os01g13100  LOC_Os01g13090  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
CCGGCTTTTACGTGCTTGTCgtatcctagattttagtacgaatgttatttatagtagtggcatggttaga ... aattaagagtttagtgtaaatgctttcgattttcttaataccaagttcagAAGTTATTACTGATGCATTT



#3
gene: AT3G16230, transcript: AT3G16230.3
Orthologs: LOC_Os01g13100  LOC_Os01g13090  PP1S106_148V6  SELMODRAFT_135207  SELMODRAFT_88393  GRMZM2G093104  
CCGGCTTTTACGTGCTTGTCgtatcctagattttagtacgaatgttatttatagtagtggcatggttaga ... aattaagagtttagtgtaaatgctttcgattttcttaataccaagttcagAAGTTATTACTGATGCATTT