ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



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#1
gene: AT3G13460, transcript: AT3G13460.1
Orthologs: GLYMA08G13130  GLYMA05G30020  LOC_Os03g53670  LOC_Os03g06240  Vv06s0004g00200  GRMZM2G126338  GRMZM2G433616  GRMZM2G076062  GRMZM2G330019  
CGTTGCTCCTCCTGCTGATCgtatcctttctttatgtttctcgatctgtgttttgatttctcgatcttga ... taatggttaattgtgtaattctttgcttccttgactcaccttgtttgtagAAGCTACAGATCTGTTGCAG



#2
gene: AT3G13460, transcript: AT3G13460.2
Orthologs: GLYMA08G13130  GLYMA05G30020  LOC_Os03g53670  LOC_Os03g06240  Vv06s0004g00200  GRMZM2G126338  GRMZM2G433616  GRMZM2G076062  GRMZM2G330019  
CGTTGCTCCTCCTGCTGATCgtatcctttctttatgtttctcgatctgtgttttgatttctcgatcttga ... attgtgtaattctttgcttccttgactcaccttgtttgtagaagctacagATCTGTTGCAGAAACTATCC



#3
gene: AT3G13460, transcript: AT3G13460.3
Orthologs: GLYMA08G13130  GLYMA05G30020  LOC_Os03g53670  LOC_Os03g06240  Vv06s0004g00200  GRMZM2G126338  GRMZM2G433616  GRMZM2G076062  GRMZM2G330019  
CGTTGCTCCTCCTGCTGATCgtatcctttctttatgtttctcgatctgtgttttgatttctcgatcttga ... taatggttaattgtgtaattctttgcttccttgactcaccttgtttgtagAAGCTACAGATCTGTTGCAG



#4
gene: AT3G13460, transcript: AT3G13460.4
Orthologs: GLYMA08G13130  GLYMA05G30020  LOC_Os03g53670  LOC_Os03g06240  Vv06s0004g00200  GRMZM2G126338  GRMZM2G433616  GRMZM2G076062  GRMZM2G330019  
CGTTGCTCCTCCTGCTGATCgtatcctttctttatgtttctcgatctgtgttttgatttctcgatcttga ... tggttaattgtgtaattctttgcttccttgactcaccttgtttgtagaagCTACAGATCTGTTGCAGAAA