ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT3G04630, transcript: AT3G04630.1
Orthologs: GLYMA03G40820 GLYMA20G36900 GLYMA19G43520 GLYMA10G30570 LOC_Os07g08790 LOC_Os03g58480 Vv14s0081g00480 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
AATTGCTCCATTGCTTCTTCgtatccttttcccatctctatcattttatacttgatacttatgtatggat ... cacgatgcttaacagaatcgatattgtttccttaacgttatttaccacagCGTTGCAACTTCCATGAGGA

#2
gene: AT3G04630, transcript: AT3G04630.2
Orthologs: GLYMA03G40820 GLYMA20G36900 GLYMA19G43520 GLYMA10G30570 LOC_Os07g08790 LOC_Os03g58480 Vv14s0081g00480 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
AATTGCTCCATTGCTTCTTCgtatccttttcccatctctatcattttatacttgatacttatgtatggat ... cacgatgcttaacagaatcgatattgtttccttaacgttatttaccacagCGTTGCAACTTCCATGAGGA

#3
gene: AT3G04630, transcript: AT3G04630.3
Orthologs: GLYMA03G40820 GLYMA20G36900 GLYMA19G43520 GLYMA10G30570 LOC_Os07g08790 LOC_Os03g58480 Vv14s0081g00480 AC148167.6_FG001 GRMZM2G082809 GRMZM2G121176 GRMZM2G163912
AATTGCTCCATTGCTTCTTCgtatccttttcccatctctatcattttatacttgatacttatgtatggat ... cacgatgcttaacagaatcgatattgtttccttaacgttatttaccacagCGTTGCAACTTCCATGAGGA