ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT2G39810, transcript: AT2G39810.1
Orthologs: GLYMA11G03840 GLYMA01G41590 LOC_Os03g52700 PP1S51_66V6 PP1S274_80V6 SELMODRAFT_81560 SELMODRAFT_88092 Vv00s0299g00030 GRMZM2G312738 GRMZM2G078736 AC190915.3_FG007 GRMZM2G473172
GATCTCGGTGGTTTGCCATTgtatccttcagttgcatttatgcttggtgtctgatatatgcatttagtct ... tattttatgttggatgcatagttgacatctccttgacagaaaattaatagATATCACCAATGTCTGTATG

#2
gene: AT2G39810, transcript: AT2G39810.1
Orthologs: GLYMA11G03840 GLYMA01G41590 LOC_Os03g52700 PP1S51_66V6 PP1S274_80V6 SELMODRAFT_81560 SELMODRAFT_88092 Vv00s0299g00030 GRMZM2G312738 GRMZM2G078736 AC190915.3_FG007 GRMZM2G473172
AGCTGAACTTCAAGAAATCTgtatccttttagctgttaatatttttatgtttcttaagactgtatatttgtgcaccgtaaggtctgtctatctttaatattggccctcagATAATCTTGAAACAAAAGAG

#3
gene: AT2G39810, transcript: AT2G39810.1
Orthologs: GLYMA11G03840 GLYMA01G41590 LOC_Os03g52700 PP1S51_66V6 PP1S274_80V6 SELMODRAFT_81560 SELMODRAFT_88092 Vv00s0299g00030 GRMZM2G312738 GRMZM2G078736 AC190915.3_FG007 GRMZM2G473172
TTGTTGCGAAGCAAGCAATTgtatccttttgtcatcgcctagtttcacattacattgcactttactttta ... aaacattcccatgtttttcctttacgctggtttccttaaccagaagatagTTTCTTTACTACCTGTTTGA