ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT2G36010, transcript: AT2G36010.1
Orthologs: GLYMA02G35850 GLYMA10G09410 LOC_Os02g33430 LOC_Os12g06200 PP1S22_60V6 PP1S38_356V6 SELMODRAFT_136738 SELMODRAFT_137588 Vv08s0007g02510 GRMZM2G041701 GRMZM2G052515
GGATATTTGGAAAACTGACTgtatcctttgcatatatgcaatttgtttctctcttatagttaactatatctatctgcataagatataaatacgcaatccttaactctagcaaaagCTGGTATCGATTGGGATTAT

#2
gene: AT2G36010, transcript: AT2G36010.2
Orthologs: GLYMA02G35850 GLYMA10G09410 LOC_Os02g33430 LOC_Os12g06200 PP1S22_60V6 PP1S38_356V6 SELMODRAFT_136738 SELMODRAFT_137588 Vv08s0007g02510 GRMZM2G041701 GRMZM2G052515
GGATATTTGGAAAACTGACTgtatcctttgcatatatgcaatttgtttctctcttatagttaactatatctatctgcataagatataaatacgcaatccttaactctagcaaaagCTGGTATCGATTGGGATTAT

#3
gene: AT2G36010, transcript: AT2G36010.3
Orthologs: GLYMA02G35850 GLYMA10G09410 LOC_Os02g33430 LOC_Os12g06200 PP1S22_60V6 PP1S38_356V6 SELMODRAFT_136738 SELMODRAFT_137588 Vv08s0007g02510 GRMZM2G041701 GRMZM2G052515
GGATATTTGGAAAACTGACTgtatcctttgcatatatgcaatttgtttctctcttatagttaactatatctatctgcataagatataaatacgcaatccttaactctagcaaaagCTGGTATCGATTGGGATTAT