ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT2G27840, transcript: AT2G27840.1
Orthologs: GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  LOC_Os05g51830  LOC_Os01g68104  GRMZM2G100146  GRMZM2G159032  GRMZM5G898314  GRMZM2G057044  GRMZM5G842990  
TTTGATGCTTTTGACGAACTatatcctttctttcattgtctttttctagttaaattcatactcacttgca ... tgtttgtttatccttgattttgttttgctctgcttttttctgatgctcacGGATGAGGAGATTGATTCTG



#2
gene: AT2G27840, transcript: AT2G27840.2
Orthologs: GLYMA12G30600  GLYMA12G09000  GLYMA11G19480  LOC_Os05g51830  LOC_Os01g68104  GRMZM2G100146  GRMZM2G159032  GRMZM5G898314  GRMZM2G057044  GRMZM5G842990  
TTTGATGCTTTTGACGAACTatatcctttctttcattgtctttttctagttaaattcatactcacttgca ... tgtttgtttatccttgattttgttttgctctgcttttttctgatgctcacGGATGAGGAGATTGATTCTG