ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT1G79610, transcript: AT1G79610.1
Orthologs: GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_144857 SELMODRAFT_163708 Vv15s0024g00280 GRMZM2G067747
TTGGATTCACCTCTGCTCTCatatcctttttgtgcttttagattcttctgaaacatttcacttcattccatacacatagacgagttgttagccttaatgtaaagcacCTATTCAAGTATGCAGGACT

#2
gene: AT1G79610, transcript: AT1G79610.1
Orthologs: GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_144857 SELMODRAFT_163708 Vv15s0024g00280 GRMZM2G067747
GATTCATATTTTTTTCTATTgtatcctcttactcaagttttactggattggagttgaattatttccttagtttatatgttgttccttaactttcttttcatccttggtgacgaacctcagTTATTTATCGTAATTGCAAG

#3
gene: AT1G79610, transcript: AT1G79610.1
Orthologs: GLYMA15G13030 GLYMA09G02130 GLYMA07G40070 LOC_Os09g11450 PP1S158_27V6 SELMODRAFT_144857 SELMODRAFT_163708 Vv15s0024g00280 GRMZM2G067747
CTGCTGCCTCCCATCATATTatatccttaaaatcgagtttgtatctgcctttagttttacttacgcctct ... ctcaactaggcaacaaaatatgttgttttccttgacgtacttgtttgcacCCAGTCAGGCTTCAGTTTAC