ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT1G61150, transcript: AT1G61150.1
Orthologs: GLYMA15G07570  GLYMA13G31720  PP1S268_9V6  PP1S379_20V6  Vv10s0116g00670  
AAGGGAGTCTGGAACCAAACgtatcctttttctgattctggttttgagtttttgtttatggaattggtgt ... tttgatgtttagcttatctactccttttgaacttccttatcgagaaacagCAGAGATAGATCTTGCGACC



#2
gene: AT1G61150, transcript: AT1G61150.2
Orthologs: GLYMA15G07570  GLYMA13G31720  PP1S268_9V6  PP1S379_20V6  Vv10s0116g00670  
AAGGGAGTCTGGAACCAAACgtatcctttttctgattctggttttgagtttttgtttatggaattggtgt ... tttgatgtttagcttatctactccttttgaacttccttatcgagaaacagCAGAGATAGATCTTGCGACC



#3
gene: AT1G61150, transcript: AT1G61150.4
Orthologs: GLYMA15G07570  GLYMA13G31720  PP1S268_9V6  PP1S379_20V6  Vv10s0116g00670  
AAGGGAGTCTGGAACCAAACgtatcctttttctgattctggttttgagtttttgtttatggaattggtgt ... tttgatgtttagcttatctactccttttgaacttccttatcgagaaacagCAGAGATAGATCTTGCGACC



#4
gene: AT1G61150, transcript: AT1G61150.5
Orthologs: GLYMA15G07570  GLYMA13G31720  PP1S268_9V6  PP1S379_20V6  Vv10s0116g00670  
AAGGGAGTCTGGAACCAAACgtatcctttttctgattctggttttgagtttttgtttatggaattggtgt ... tttgatgtttagcttatctactccttttgaacttccttatcgagaaacagCAGAGATAGATCTTGCGACC



#5
gene: AT1G61150, transcript: AT1G61150.6
Orthologs: GLYMA15G07570  GLYMA13G31720  PP1S268_9V6  PP1S379_20V6  Vv10s0116g00670  
AAGGGAGTCTGGAACCAAACgtatcctttttctgattctggttttgagtttttgtttatggaattggtgt ... tttgatgtttagcttatctactccttttgaacttccttatcgagaaacagCAGAGATAGATCTTGCGACC