ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT1G49300, transcript: AT1G49300.1
Orthologs: GLYMA12G04830  GLYMA11G12630  LOC_Os05g44050  SELMODRAFT_228953  SELMODRAFT_228214  Vv03s0063g02420  GRMZM2G044368  GRMZM2G158887  GRMZM5G811797  
AAGACTTCTTTAATGAATCAgtatcctaaattttctgtgcatggagtcaagaggatgctactacaatgtt ... cgagttagatgagtttgtgtttctgtttcactttaacaacacgcctttagATATGTTAATAAGAAGTTCA



#2
gene: AT1G49300, transcript: AT1G49300.2
Orthologs: GLYMA12G04830  GLYMA11G12630  LOC_Os05g44050  SELMODRAFT_228953  SELMODRAFT_228214  Vv03s0063g02420  GRMZM2G044368  GRMZM2G158887  GRMZM5G811797  
AAGACTTCTTTAATGAATCAgtatcctaaattttctgtgcatggagtcaagaggatgctactacaatgtt ... cgagttagatgagtttgtgtttctgtttcactttaacaacacgcctttagATATGTTAATAAGAAGTTCA