ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT1G32400, transcript: AT1G32400.1
Orthologs: GLYMA17G16370  GLYMA01G40890  GLYMA11G04450  GLYMA05G06080  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
GTGTCTGCTGCTTATCTTGCgtatcctaattacttaacttgcttttcttatccaacatttcctgttagat ... ccttaagcaaactaaaagtcttaacctttcatttccttaattgagaatagTACTCTCTTCTTCTGATCTT



#2
gene: AT1G32400, transcript: AT1G32400.2
Orthologs: GLYMA17G16370  GLYMA01G40890  GLYMA11G04450  GLYMA05G06080  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
GTGTCTGCTGCTTATCTTGCgtatcctaattacttaacttgcttttcttatccaacatttcctgttagat ... ccttaagcaaactaaaagtcttaacctttcatttccttaattgagaatagTACTCTCTTCTTCTGATCTT



#3
gene: AT1G32400, transcript: AT1G32400.3
Orthologs: GLYMA17G16370  GLYMA01G40890  GLYMA11G04450  GLYMA05G06080  LOC_Os08g18044  LOC_Os08g06250  PP1S64_81V6  PP1S197_11V6  PP1S54_193V6  SELMODRAFT_172827  Vv02s0012g00560  GRMZM2G049422  GRMZM2G138429  GRMZM2G065076  
GTGTCTGCTGCTTATCTTGCgtatcctaattacttaacttgcttttcttatccaacatttcctgttagat ... ccttaagcaaactaaaagtcttaacctttcatttccttaattgagaatagTACTCTCTTCTTCTGATCTT