ERISdb: a Database of Plant Splice Sites



Select a species and type of splice site




OR, alternatively, select a gene name


 atgc   highly conserved terminal intronic nucleotides at 5' or 3' end.

 atgc   branch site.


#1
gene: AT1G29120, transcript: AT1G29120.1
Orthologs: GLYMA08G12210 GLYMA05G29070 PP1S149_283V6 Vv10s0003g01230 GRMZM2G103137
TGCAAACGTATCTTATGACCgtatcctgtgcatttctgttgctgtttaactagtacagatgtgcctagctgtgtctgcatttgttttctgaactgtttcctttgacatcaagtagACATGGTTGGTTGGCGTACA

#2
gene: AT1G29120, transcript: AT1G29120.2
Orthologs: GLYMA08G12210 GLYMA05G29070 PP1S149_283V6 Vv10s0003g01230 GRMZM2G103137
TGCAAACGTATCTTATGACCgtatcctgtgcatttctgttgctgtttaactagtacagatgtgcctagctgtgtctgcatttgttttctgaactgtttcctttgacatcaagtagACATGGTTGGTTGGCGTACA

#3
gene: AT1G29120, transcript: AT1G29120.3
Orthologs: GLYMA08G12210 GLYMA05G29070 PP1S149_283V6 Vv10s0003g01230 GRMZM2G103137
TGCAAACGTATCTTATGACCgtatcctgtgcatttctgttgctgtttaactagtacagatgtgcctagctgtgtctgcatttgttttctgaactgtttcctttgacatcaagtagACATGGTTGGTTGGCGTACA

#4
gene: AT1G29120, transcript: AT1G29120.4
Orthologs: GLYMA08G12210 GLYMA05G29070 PP1S149_283V6 Vv10s0003g01230 GRMZM2G103137
TGCAAACGTATCTTATGACCgtatcctgtgcatttctgttgctgtttaactagtacagatgtgcctagctgtgtctgcatttgttttctgaactgtttcctttgacatcaagtagACATGGTTGGTTGGCGTACA

#5
gene: AT1G29120, transcript: AT1G29120.5
Orthologs: GLYMA08G12210 GLYMA05G29070 PP1S149_283V6 Vv10s0003g01230 GRMZM2G103137
TGCAAACGTATCTTATGACCgtatcctgtgcatttctgttgctgtttaactagtacagatgtgcctagctgtgtctgcatttgttttctgaactgtttcctttgacatcaagTAGACATGGTTGGTTGGCGT