ERISdb: a Database of Plant Splice Sites

Select a species and type of splice site

OR, alternatively, select a gene name

atgc highly conserved terminal intronic nucleotides at 5' or 3' end.

atgc branch site.



#1
gene: AT1G06890, transcript: AT1G06890.1
Orthologs: GLYMA06G14970  GLYMA04G39920  LOC_Os01g07310  LOC_Os05g07670  PP1S123_22V6  PP1S311_78V6  SELMODRAFT_268896  SELMODRAFT_268189  Vv13s0067g02970  GRMZM2G063253  GRMZM2G063511  GRMZM2G116053  GRMZM2G081848  
CAACTTGTGTTGCTCAAATTgtatcctatgcctagcctttggtttctcattgctttattctttcaccttt ... atcttgtcttaaaccaattcgatgctgttatcttaaccaattgtacacagATGACAAATACCATCCAGAA



#2
gene: AT1G06890, transcript: AT1G06890.2
Orthologs: GLYMA06G14970  GLYMA04G39920  LOC_Os01g07310  LOC_Os05g07670  PP1S123_22V6  PP1S311_78V6  SELMODRAFT_268896  SELMODRAFT_268189  Vv13s0067g02970  GRMZM2G063253  GRMZM2G063511  GRMZM2G116053  GRMZM2G081848  
CAACTTGTGTTGCTCAAATTgtatcctatgcctagcctttggtttctcattgctttattctttcaccttt ... atcttgtcttaaaccaattcgatgctgttatcttaaccaattgtacacagATGACAAATACCATCCAGAA



#3
gene: AT1G06890, transcript: AT1G06890.3
Orthologs: GLYMA06G14970  GLYMA04G39920  LOC_Os01g07310  LOC_Os05g07670  PP1S123_22V6  PP1S311_78V6  SELMODRAFT_268896  SELMODRAFT_268189  Vv13s0067g02970  GRMZM2G063253  GRMZM2G063511  GRMZM2G116053  GRMZM2G081848  
CAACTTGTGTTGCTCAAATTgtatcctatgcctagcctttggtttctcattgctttattctttcaccttt ... atcttgtcttaaaccaattcgatgctgttatcttaaccaattgtacacagATGACAAATACCATCCAGAA