1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
AGATCACGGCGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccactacaaagaacatgatttcaaaaaaaagaaaatgcatgatatatacaaaaaaaaacttcaaagaacaatagtgtggtgcttctgcattgccaatgcttgcttgcttaccctctgctcaatgcaaaccgcag
species | Zea mays |
transcript | GRMZM5G877788_T03 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTG GCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGAEST: gi|71427484|gb|DR808534.1|DR808534
genomic: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccac ... caaaccgcagGCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
EST: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTG GCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGAEST: gi|74233874|gb|DT641788.1|DT641788
genomic: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccac ... caaaccgcagGCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
EST: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTG GCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGAEST: gi|71428520|gb|DR809570.1|DR809570
genomic: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccac ... caaaccgcagGCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
EST: GCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTG GCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGAEST: gi|78084898|gb|DV513291.1|DV513291
genomic: GCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccac ... caaaccgcagGCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
EST: CGGCCTCAGCTTTGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTG GCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
genomic: CGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccac ... caaaccgcagGCGCCAGTCTCCTGGTGTACCAAATCTTCGCCTACCGTTGGGTCAACAAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGATCACGGCGGCCTCAGCTTCGCGTCCAAGGACGTCGGCCAAGTCCTCACCGTCGCTGgtaactccactacaaagaacatgatttcaaaaaaaagaaaatgcatgatatatacaaaaaaaaacttcaaagaacaatagtgtggtgcttctgcattgccaatgcttgcttgcttaccctctgctcaatgcaaaccgcag
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