1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCCgtgatgcccaagagaaggtcctcccgtaagtcttatattctgtaacacgatgctcagtgttttaaatttcattcaaggctgcatatagcaactcagtgaa...
species | Zea mays |
transcript | GRMZM2G540538_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCC GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCAEST: gi|78543652|gb|DV621150.1|DV621150
genomic: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCCgtgatgccca ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCC GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCAEST: gi|21331346|gb|BQ486727.1|BQ486727
genomic: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCCgtgatgccca ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
EST: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCC GTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
genomic: GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCCgtgatgccca ... tcgcttctagGTGATGCTTTCGTTGGAGGCTTCCTCTCACAGTTGGTTCTAGGCAAGGGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTTCCTGATGAACCTCTCTGCTCCCTTCATTTGTGAGTTCTTCCgtgatgcccaagagaaggtcctcccgtaagtcttatattctgtaacacgatgctcagtgttttaaatttcattcaaggctgcatatagcaactcagtgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aagagaag