1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ACATATGTTGCCAAACTTTAATGAGTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTGgtgagacctttggagataattaatgttcatgtctcatacattcagttacctttcttacattaatgtgatctgcaataagttagaagtaagcagtcgacat...
species | Zea mays |
transcript | GRMZM2G477340_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTG GTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATGEST: gi|33099553|gb|CF059513.1|CF059513
genomic: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTGgtgagacctt ... tttgatacagGTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATG
EST: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTG GTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATGEST: gi|33100318|gb|CF060278.1|CF060278
genomic: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTGgtgagacctt ... tttgatacagGTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATG
EST: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTG GTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATG
genomic: GTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTGgtgagacctt ... tttgatacagGTATTTGGGCAGGAATGCACACAGTCCGTTACTTTGATGGCAAAACATATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATATGTTGCCAAACTTTAATGAGTGCTGGTGGGATAGCATTATTTTGGATATCTTGATCTGCAATTGGTTTGgtgagacctttggagataattaatgttcatgtctcatacattcagttacctttcttacattaatgtgatctgcaataagttagaagtaagcagtcgacat
- - - - - - - - - - - - - - TGGTGG