1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTTGGCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATGgtaaatcctcctatgtaatgccaatttggttctgaaataattccagtaatagactgacttagcgtctttatcttgcag
species | Zea mays |
transcript | GRMZM2G171469_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATG ATGTGCTTGATTGCTTTTTACAA-GATGCTEST: gi|5895618|gb|AW036864.1|AW036864
genomic: GCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATGgtaaatcctc ... tatcttgcagATGTGCTTGAGTGCTTTTAACAAAGATGCT
EST: GCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATG ATGTGCTTGAGTGCTTTTAACAAAGATGCTGATCTTGATGTTCTGAACCAT
genomic: GCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATGgtaaatcctc ... tatcttgcagATGTGCTTGAGTGCTTTTAACAAAGATGCTGATCTTGATGTTCTGAACCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGCTATGTGACCACCATTTGCTTTGGTTGCTTCTTGATCAGATGCATAATGgtaaatcctcctatgtaatgccaatttggttctgaaataattccagtaatagactgacttagcgtctttatcttgcag
- - - - - - - - - - - - - - - - - - - - CAGATG