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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACCAACAGCAAACAAGTTGCTCGAACACCCATTTATCCAAACTTTGAACCACTACAGCCCACATAGCGTTGTACATTCATTTTCGGGAATTAAATCTCCAgtaagctttctgactttctccttatgacatgtgatatccaaagtttcaacttaaagctttatgcatatgtataattggcttgttggtgtcag

Basic information

species Zea mays
transcript GRMZM2G156800_T02
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|60345120|gb|DN212093.1|DN212093
EST:     ACTACAGCCCACATAGCGTTGTACATTCATTTTCGGGAATTAAATCTCCA                         GATACTGTGCACAGCAGTGCAAGAGATAAAGTACCCTGGAAAAGTGATTCA
genomic: ACTACAGCCCACATAGCGTTGTACATTCATTTTCGGGAATTAAATCTCCAgtaagctttc ... ttggtgtcagGATACTGTGCACAGCAGTGCAAGAGATAAAGTACCCTGGAAAAGTGATTCA
EST: gi|166573023|gb|EG319912.1|EG319912
EST:     CGGGAATTAAATCTCCA                         GATACTGTGCACAGCAGTGCAAGAGATAAAGTACCCTGGAAAAGTGATTCA
genomic: CGGGAATTAAATCTCCAgtaagctttc ... ttggtgtcagGATACTGTGCACAGCAGTGCAAGAGATAAAGTACCCTGGAAAAGTGATTCA