1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTTGGTGCATCCTTATAAATGACAAAGTCCAGTTCAGGATGCAATGGCCTCAATATGCAGAATTGCAAGTGAACGgtaatgtttaaattttcttgtacaacttggatttattaaaatgcattgtggcacaaatcttggcttatatgctgtatagatacatatatctgagccatacaagtttaatttacattcatacttgaaattaagggattgccagtctgatatttatttctgtttgttcag
species | Zea mays |
transcript | GRMZM2G155123_T01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CAGAATTGCAAGTGAACG GTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTTAGTTACTAGGGATAAEST: gi|166438554|gb|EG322330.1|EG322330
genomic: CAGAATTGCAAGTGAACGgtaatgttta ... gtttgttcagGTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTCAGTTACTAGGGATAA
EST: TGCAGAATTGCAAGTGAACG GTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTCAGTTACTAGGGATAAEST: gi|211126749|gb|FL432557.1|FL432557
genomic: TGCAGAATTGCAAGTGAACGgtaatgttta ... gtttgttcagGTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTCAGTTACTAGGGATAA
EST: AGTCCAGTTCAGGATGCAATGGCCTCAATATGCAGAATTGCAAGTGAACG GTATTCCTGTACGAGTAATGACCAGGCCTGGTTCTCAGTTACTAGGGATAA
genomic: AGTCCAGTTCAGGATGCAATGGCCTCAATATGCAGAATTGCAAGTGAACGgtaatgttta ... gtttgttcagGTATTCCTGTACGAGTAATGACCAGGCCCGGTTCTCAGTTACTAGGGATAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGGTGCATCCTTATAAATGACAAAGTCCAGTTCAGGATGCAATGGCCTCAATATGCAGAATTGCAAGTGAACGgtaatgtttaaattttcttgtacaacttggatttattaaaatgcattgtggcacaaatcttggcttatatgctgtatagatacatatatctgagccatacaagtttaatttacattcatacttgaaattaagggattgccagtctgatatttatttctgtttgttcag
- - - - - - - - - - - - - - - - - - AGGATG