1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTCTAACATGATGAGGCTGACTATGAACAGCAGATACGAGTTTCATAGCTGGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaacctaatgcgttgttcatgaggctactctgctgctcttatttgtctaattcaactccatatgccctatgtgacag
species | Zea mays |
transcript | GRMZM2G144254_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|6227147|gb|AW155676.1|AW155676
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|113701592|gb|EE679096.1|EE679096
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: TGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|211277446|gb|FL309933.1|FL309933
genomic: TGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|19822362|gb|BQ048386.1|BQ048386
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|19822356|gb|BQ048380.1|BQ048380
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTTEST: gi|78022546|gb|DV490933.1|DV490933
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
EST: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGG ATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
genomic: GGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaa ... tatgtgacagATGGGAAGATTGAATGAAGGGTTGTCATTATTTGATGCAATACTGATTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCTAACATGATGAGGCTGACTATGAACAGCAGATACGAGTTTCATAGCTGGTTCACATACTCAATTGTTCTTCTGTTTCTGTGTACCGCTGGATTTTGGgtatggctaacctaatgcgttgttcatgaggctactctgctgctcttatttgtctaattcaactccatatgccctatgtgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA