1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TGAGTGGGAACTTCTGAATGATGTGAAGGCTGTATGGCTTCGCAGCCCAAAGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactgtagcaatggattagttagtagtactcaacatttgtttttgccaaagaaagctttgcttgtacaccttgtttgataaatatttgtatataacttaacaattcttttttcag
species | Zea mays |
transcript | GRMZM2G141931_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: ATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTACGTGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|67017884|gb|CO446633.1|CO446633
genomic: ATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|60344141|gb|DN211114.1|DN211114
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: GGAGGTTACCGAGGAAGGAATACTCGAAGTTTTCCCATTCACTAGCCAAG GACTTCGGGGATGACAAGCTTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|21987199|gb|BQ778727.1|BQ778727
genomic: GGAGGTTACCGATGAA-GAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|21987561|gb|BQ779089.1|BQ779089
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGAEST: gi|67040100|gb|CO466355.1|CO466355
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
EST: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAG GACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
genomic: AGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactg ... cttttttcagGACTTCGGTGATGACAAGCCTATGGGTTGGAGCCACTTCACTGCCGAAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGTGGGAACTTCTGAATGATGTGAAGGCTGTATGGCTTCGCAGCCCAAAGGAGGTTACCGATGAAGAATACTCGAAGTTTTACCATTCACTAGCCAAGgtaaatactgtagcaatggattagttagtagtactcaacatttgtttttgccaaagaaagctttgcttgtacaccttgtttgataaatatttgtatataacttaacaattcttttttcag
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