1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CCGTTCAACCTGGAAGACACATCAAGTTTTAGGGACCTTGATGAACACAGgtaatgttagtgtttgtcaactatagttattctattccccatttcaagtttgaggggatttgatctacccacttgtgattaaatctgtaaatttgcttca...
species | Zea mays |
transcript | GRMZM2G136803_T02 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: GAAGACACATCAAGTTTTAGGGACCTTGATGAACACAG CAAAAATATCCTCAGAAGATTGTATTATGACTATTATTTTGTTCGCCAAGAEST: gi|32836690|gb|CD976368.1|CD976368
genomic: GAAGACACATCAAGTTTTAGGGACCTTGATGAACACAGgtaatgttag ... cattttacagCAAAAATATCCTCAGAAGATTGTATTATAACTATTATTTTGTTCGCCAAGA
EST: CEST: gi|32932809|gb|CF037621.1|CF037621
genomic: T
EST: TTCAACCTGGAAGACACATCAAGTTTTAGGGACCTTGATGAACACAG CAAAAATATCCTCAGAAGATTGTATTATGACTATTATTTTGTTCGCCAAGAEST: gi|32932023|gb|CF036835.1|CF036835
genomic: TTCAACCTGGAAGACACATCAAGTTTTAGGGACCTTGATGAACACAGgtaatgttag ... cattttacagCAAAAATATCCTCAGAAGATTGTATTATAACTATTATTTTGTTCGCCAAGA
EST: CEST: gi|32930164|gb|CF034976.1|CF034976
genomic: T
EST: CEST: gi|32931864|gb|CF036676.1|CF036676
genomic: T
EST: CEST: gi|32837361|gb|CD977039.1|CD977039
genomic: T
EST: CCGTTTCAACCTGGAAGACACATCAAGTTTTAGGGACCTTGATGAACACAG
genomic: GACACATCAAGTTTTAGGGACCTTGATGAACACAGgtaatgttag ... cattttacagC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGTTCAACCTGGAAGACACATCAAGTTTTAGGGACCTTGATGAACACAGgtaatgttagtgtttgtcaactatagttattctattccccatttcaagtttgaggggatttgatctacccacttgtgattaaatctgtaaatttgcttca
- - - - - TGGAAG
- - - - - GGAAGA